Biology of the Breast Cell

To understand the origin of breast cancers, more research is needed on the architecture, cell interactions, and molecular pathways in the normal breast. Understanding how cells coordinate migration, maturation, proliferation, and cell death over space and time gives us the foundation from which to learn what it is that makes a tumor cell. The CBCRP funded studies that model normal pre-cancer and tumor breast to learn how cancer develops, and moves to other parts of the body. Important basic science topics represented in CBCRP’s portfolio include: exploring the role of stem cells in normal and tumor breast; cell proliferation control mechanisms through the estrogen receptor and growth factor receptors (e.g., Her-2); alterations in DNA repair processes that permit genetic damage to accumulate in cancer cells; cell cycle changes that permit division under conditions where normal cells would undergo programmed cell death (apoptosis); novel biomarkers to distinguish pre-cancerous and cancerous cells from normal breast epithelium and their validation as potential new detection and therapy targets, and developing methods for accounting for the complexity of the interplay of all of these factors in breast cancer.

Two research topics are presented in this section.

Research Conclusions

Normal Mammary Biology of Phosphorylated Prolactin
The hormone prolactin has two major forms, an unmodified form that promotes cell proliferation and a phosphorylated form that inhibits cell proliferation. Ameae Walker, Ph.D., at the University of California, Riverside, and colleagues explored the effect of both types of prolactin on the breast. Ms. Walker and her team demonstrated that prolactin turns into the phosphorylated form that inhibits cell proliferation when the mammary gland. They also showed that unmodified prolactin makes changes in the cells that favor proliferation, whereas phosphorylated prolactin makes changes that reduce cell proliferation and, under some circumstances, lead to cell death. These findings suggest that phosphorylated prolactin is beneficial to breast health, and may help explain why breastfeeding reduces breast cancer risk. While conducting this research, Dr. Walker identified a new molecule inside breast cells. She also found that the ratio of this molecule to another molecule is associated with the absence or presence of breast cancer, and that breast cells grow faster when exposed to more of this molecule. This work could lead to new methods of assessing breast cancer risk that involve measuring prolactin levels. It also could lead to the development of new treatments that use phosphorylated prolactin (or a molecular mimic of it) to prevent or treat breast cancer.

Axon Guidance Proteins in Mammary Gland Development
The Slits are a protein family found in many organs, including the breast. Some studies have suggested that Slits are a tumor suppressor gene that can stop cancer cells from growing and spreading, but others have found that the Slit gene does not function in breast cancer cells. Using a mouse model, Lindsay Hinck, Ph.D., at the University of California, Santa Cruz, and colleagues showed that the Slit gene stops functioning in breast cells that have increased levels of the protein Cxcr4 and a molecule related to it called Sdfe1. They also discovered that high levels of Slit are correlated with lower levels of Cxcr4 and decreased tumor growth, and that there is a similar inverse correlation between Slit and Cxcr4 expression in human breast tumor tissue. These findings support previous research that has demonstrated that Cxcr4 and Sdf1 play a pivotal role in breast cancer growth and metastasis. It also suggests that Slit may be a marker of whether a cancer cell has the potential to become invasive. Dr. Hinck received a grant from the National Cancer Institute that will allow her to further investigate how Slit functions. This work could lead to the development of new treatment strategies to prevent invasive breast cancer. Findings from this research were published in Development 2006(133)823 and Cancer Research 2008(68)7919.

A Candidate Marker of Mammary Tumor Initiating Cells
Researchers have shown that only a small number of breast cancer cells are able to produce tumors when they are transplanted into an animal model. These cells, called cancer stem cells, may be good targets for drug treatments. However, no one has yet identified a functional marker on these cells. Alexey Terskikh, Ph.D., at The Burnham Institute for Medical Research, La Jolla, and colleagues investigated whether a newly discovered gene, called MELK (maternal embryonic leucine- zipper kinase), might be a functional marker for breast cancer stem cells. Studies have shown that MELK is turned on in a number of different cancer cell lines, but the exact role it plays is not known. This project allowed Dr. Terskikh and his team to complete the animal breeding necessary to develop mice with the proper genetic structure needed for their experiments. The studies they conducted with these mice found that MELK appears to be a marker for breast cancer stem cells. This work suggests that the small molecule inhibitors of MELK that Dr. Terskikh’s colleagues at the Burnham Institute for Medical Research are developing may make effective breast cancer treatments.

A New Marker for Mammary Epithelial Stem Cells?
Scientists believe that it is the breast epithelial stem cells that give the breast the ability to grow and start making milk after each pregnancy. Robert Oshima, Ph.D., at The Burnham Institute for Medical Research, La Jolla, discovered a new marker gene, called maternal embryonic leucinezipper kinase (Melk), on several types of stem cells. This research project allowed Dr. Oshima to explore in both cell and animal models whether Melk is also present in breast epithelial stem cells. Dr. Oshima and his team found that the dividing cells that contribute to the interior lining of the breast ducts are the breast cells that express the most Melk protein. But even though these cells increase rapidly, they do not have same ability that stem cells do to generate a new mammary gland. Dr. Oshima is continuing to explore the relationship between Melk-producing cells and cancer stem cells.

The Role of the ECM in Breast Cancer DNA Damage Repair
The extracellular matrix (ECM) provides structural support to cells. It also gives chemical cues that can stop cells from becoming cancerous. Albert Davalos, Ph.D., at the Lawrence Berkeley National Laboratory, used 3-D breast cell and animal models to investigate the role the ECM’s basement membrane plays in breast cancer progression. Dr. Davalos and his team found that exposing epithelial cells that lack a BRCA1 gene to drugs that disrupt cell replication causes them to develop a mutation in a key tumor suppressor protein called p53. In addition, they grow more rapidly and fail to die. Their research also showed that exposing cells that are missing the BRCA1 gene and the p53 protein to drugs that disrupt cell replication causes them to fail to die and to divide with numerous DNA breaks. Dr. Davalos and his team observed the same result when they turned off the special proteins in cells that “unwind” double-stranded DNA for replications and repair processes. These findings suggest that loss of a “caretaker” and “gatekeeper” protein, like p53, allows breast epithelial cells to evade cell death and divide with more DNA damage. While doing this work, Dr. Davalos and his team discovered that a protein called HMGB1 is secreted when other repair proteins are missing. Dr. Davalos and his team are now exploring whether HMBG1 is as an early biomarker of genetic instability in breast cancer. Findings from this research were published in Cell 2007(128)97.

Stem Cells of Molecularly Diverse ER-negative Breast Cancers
Cancer stem cells comprise only a small fraction of a tumor, but they play a critical role in tumor growth. In fact, 100 cancer stem cells implanted into a mouse can reproduce a large breast tumor, whereas 20,000 malignant epithelial cells will not generate a breast tumor at all. Stefanie Jeffrey, M.D., at Stanford University, Palo Alto, used a mouse implanted with human tissue to investigate whether two subtypes of estrogen receptor negative breast cancer have different cancer stem cell populations and to explore whether cancer stem cells are the same as circulating tumor cells. Dr. Jeffrey and her team found that circulating tumor cell gene expression could vary in a single human blood sample. They also found that, in some instances, the circulating tumor cells were similar to those seen in the primary tumor, whereas in other instances they were similar to the cells in the biopsy taken from the metastases. These findings advance our understanding of the cancer stem cells and circulating tumor cells and could help lead to the development of treatments targeted at specific types of tumor cells. Findings from this research were published in BMC Genomics 2006(7)231, Bioinformatics 2007(23) 957, Breast Cancer Research 9(2007) R30, Molecular Biology 2007(8)118, Oncogene 2007(26)6269, and Radiology 2008(246)367.

A Novel Epithelial-Stromal Model of Metastatic Breast Cancer
Identifying the genes that directly regulate cell physiology and architecture in the breast can help researchers understand how breast cancer tumors spread to other organs (metastasize). Richard Neve, Ph.D., at the Lawrence Berkeley National Laboratory, and colleagues used an animal model to study the role a receptor, called EPHA2, and its protein, EFNA1, play in breast biology. They were interested in EPHA2 because it is seen in a subset of breast cancers that scientists have learned are predisposed to metastasis. Dr. Neve and his team found that reducing the EPHA2 protein keeps the cancer cells in triple-negative breast tumors from becoming invasive. (They are called triple negative because they are estrogen receptor, progesterone receptor, and Her-2 negative.) They also found that a malignant cell will not become invasive when it is adjacent to a cell with EFNA1 on its surface. This suggests that stromal cells (connective tissue cells) with EFNA1 on their surface may be able to stop breast tumors from becoming invasive. Dr. Neve and his team developed a screening system that mimics the stromal cells to study cell-to-cell interactions of EPHA2 and EFNA1 in a variety of breast tumor cell lines. These experiments indicated that this interaction has the potential to slow the growth of cancer cells. These findings provide evidence that EPHA2 plays a role in breast cancer metastasis and could lead to the development of new treatments for metastatic breast cancer.

MYC and CSN5 in the Breast Cancer “Wound Signature” Profile
In normal wound healing, as in cancer growth, there is rapid cell proliferation, cell migration, and new blood vessel development. For this reason, cancer is sometimes referred to as “wounds that do not heal.” Adam Adler, B.A., at Stanford University, Palo Alto, and colleagues previously found that when two genes, called CSN5 and MYC, are turned on, they induce a genetic process referred to as a “wound signature.” Furthermore, when this “wound signature” is present, a breast cancer is more likely to become invasive. To investigate these findings, Mr. Adler and his team developed human and mouse cell models that would allow them to explore the role of CSN5 and MYC in promoting breast cancer progression. Mr. Adler and this team found that when CSN5 or MYC is turned off in this model, cancer does not progress. This means that both genes are necessary for cancer to develop. Additional animal model studies confirmed that CSN5 is required for MYC-induced breast cancer growth. These findings show that MYC and CSN5 play a critical role in regulating breast cancer progression, and they could lead to the development of new breast cancer treatments that target CSN5. Results of this research were published in PLoS Genetics 2007(3)91e and in Cancer Research 2008(68)369 and 506.

Role of Cell Division Asymmetry in Breast Cancer Stem Cells
Breast cancers contain a small population of breast cancer stem cells that appear to be more resistant to existing treatments than other tumor cells. Claudia Petritsch, Ph.D., at the University of California, San Francisco, attempted to discover the very first changes normal stem cells undergo when they turn into breast cancer stem cells. Dr. Petritsch and her team began by developing a cell-based test to analyze the rate and nature of asymmetric cell division in mouse mammary stem cells. This test allowed them to show that normal breast stem cells undergoing asymmetric cell division generate another stem cell and a differentiating cell. They also showed that breast stem cells that do not perform this asymmetric cell division properly generate too many breast cancer stem cells. Dr. Petritsch is now exploring what occurs when she disrupts asymmetric cell division by taking out the gene Lgl-1, which regulates asymmetric cell division in the developing breast. She is studying Lgl-1 because the human equivalent of this gene, called Hugl-1, is missing in 76% of breast cancers. Dr. Petritsch and her team also intend to investigate how Lgl-1 prevents cancer from developing by preserving normal asymmetric cell divisions. This work could lead to new treatments that more specifically target breast cancer stem cells and could lead to the development of tools for the early diagnosis of breast cancer.

Role of Integrins in Lymphangiogenesis During Breast Cancer
Breast cancer spreads predominantly through lymphatic vessels and lymph nodes. The lymphatic vessels that surround breast tissue consist of a single layer of cells, called lymphatic endothelium. Barbara Susini, Ph.D., at the University of California, San Diego, previously found that the number of lymphatic vessels in breast tissue increases dramatically during breast tumor development, a process called lymphangiogenesis. Now, she is exploring the mechanisms that drive this increase in lymphatic endothelial cells or promote breast tumor cell invasion of the lymphatic vessels. Dr. Susini and her team found that growing lymphatic vessels and cells express only one protein; it is called alpha4/beta1, and it works with a molecule called VCAM in the metastatic process. They also found that the CCL21 protein and its receptor, called CCR7, help tumor cells get to the lymph nodes by making it easier for the tumor cells to attach to the lymphatic endothelium. Furthermore, they were able to identify which molecules interact with alpha4/beta1 to induce lymphatic endothelial cell migration. In addition, they discovered that tumor cells cause lymphatic vessels to grow both in the tumor and in the lymph nodes. This research advances our understanding of breast cancer metastasis and could lead to the development of new breast cancer treatments. Three papers were published on this research, including a summary in Nature Reviews Cancer 2008(8)604-17.

Imaging RhoC-induced Breast Cancer Invasion and Angiogenesis
Metastasis—the spread of cancer cells to other parts of the body—is the major cause of death in breast cancer patients. Metastasis is a highly dynamic process that occurs in several distinct steps. Konstantin Stoletov, Ph.D., at the Scripps Research Institute, La Jolla, and colleagues grew human cancer cells that contained a metastatic gene, called RhoC, in optically clear Zebrafish so that they could directly observe how tumors grow, invade, and develop new blood vessels, a process called angiogenesis. Dr. Stoletov and his team found that a gene, called RhoC, causes the tumor cell to develop specific features that allow it to penetrate the blood vessel. They also found that tumor cells only penetrate the blood vessels in places where new vessels are currently developing, and that continuous secretion of the growth factor called VEGF is necessary to create an opening in the blood vessel for the cancer cell to pass through. These findings could lead to the development of new drug treatments that target these processes. Dr. Stoletov and his team are continuing to investigate how tumor cells and blood vessels interact during metastasis. Three papers were published on this research, including a summary in Oncogene 2008(8)604-17.

Identifying Metastatic Breast Cells from Peripheral Blood
Surgeons examine the lymph nodes of breast cancer patients to assess whether metastases has occurred. But this method is not perfect, and new approaches are needed. Studies have shown that tumors shed cancer cells into the blood when they become invasive. Kristen Kulp, Ph.D., at the Lawrence Livermore National Laboratory, and colleagues are attempting to develop a blood test that could determine whether circulating tumor cells are present in the blood and, in turn, whether metastases has occurred. Dr. Kulp and her team identified a way to prepare cells for this type of analysis. However, the methods currently available to isolate circulating tumor cells are not able to detect as few as 10 cells in 15 milliliters of human blood, which is what would be necessary to identify metastases. As a result, they were not able to implement this new technique. Dr. Kulp and her team intend to monitor the development of new methods for cell isolation and will continue to attempt to develop a blood test for breast cancer metastasis. Three publications resulted from this funding, including Analytical Chemistry 2006(78)3651-8 and Journal of the American Society of Mass Spectrometry 2008(19)1230-6.

The Role of Serine and Metallo-hydrolases in Breast Cancer
Extracellular and cell-surface enzymes (a type of protein made by cells) from the serine and metallo-hydrolase family are believed to play a role in breast cancer metastases. Sherry Niessen, M.S., at Scripps Research Institute, La Jolla, and colleagues used the most advanced techniques available to identify and characterize novel serine and metallo-hydrolase enzymes that play a role in breast cancer biology. Ms. Niessen and her team found that a serine hydrolase called KIAA1363 was increased in tumors and aggressive cell lines. Additional studies showed that KIAA1363 regulated levels of a family of lipids known as monoalkylglycerol ethers (MAGEs); had an impact on a larger lipid signaling network that included lysophosphatidylcholine (alkyl¬LPC) and lysophosphatidic acid (alkyl-LPA); and suggested that KIAA1363 has an effect on these lipids. Ms. Niessen and her team were able to define an aggressive gene signature regulated by KIAA1363. This signature included a protein called Fra-1, which they demonstrated is regulated by both alkyl- LPC and alkyl-LPA. These findings indicate that KIAA1363 is an important molecule in human cancer biology, and contribute to our understanding of the role enzymes play in breast cancer progression.

Twist Activation in Breast Cancer Metastasis
Metastasis occurs when tumor cells spread from a primary site to distant organs and establish secondary tumors. During metastasis, tumor cells obtain the ability to break away from their neighbor cells and migrate. Jing Yang, Ph.D., at the University of California, San Diego, previously showed that tumor cells activate a gene called Twist to begin this process. She is now using a mouse model to investigate how Twist gets breast tumor cells to spread to distant organs. Dr. Yang found that turning the Twist gene “on” alters the form and structure of the breast. She also found that turning on Twist is sufficient to get certain human breast cancer cells to spread to distant organs, such as the lung. Using human tumor cells, Dr. Yang and her team demonstrated that Twist appears to facilitate metastasis. However, continued Twist expression appears to inhibit proliferation at metastatic sites, like the liver and lung. Dr. Yang and her team have generated new mouse models that will allow them to learn more about the impact Twist has on breast tissue. This work could establish Twist as an important prognostic marker. It could also lead to the development of new drug treatments for metastatic breast cancers.

Identification of Metastasis Competent Breast Cancer Cells
It currently is not possible to diagnose the earliest stages of metastasis. As a result, many women undergo chemotherapy and radiation to kill metastatic cells, even though it’s not known whether they are present. These post surgical treatments undoubtedly save lives, but they have no medical benefit if the cancer has not spread. Barbara Mueller, Ph.D., at the La Jolla Institute for Molecular Medicine, is developing tools that can measure a cancer cell’s ability to cause metastasis before metastasis actually occurs. Dr. Mueller and her team have identified four specific molecules that, when present, appear to indicate that a breast cancer cell has the capability to metastasize. Dr. Mueller is currently seeking funding from the National Institutes of Health to conduct the additional studies necessary to validate these findings. The ability to identify cells with metastatic potential could result in more effective use of existing treatment options. It could also lead to the development of new treatments for early stage metastatic disease.

Modeling, Targeting Acetyl-CoA Metabolism in Breast Cancer
Cancer cells differ from normal cells in that they grow uncontrollably, require increased energy, and withstand low pH and low oxygen conditions. In addition, cancer cells use glucose as an energy source in ways that normal cells do not. Chen Yang, Ph.D., at The Burnham Institute for Medical Research, La Jolla, studied how breast cancer cells metabolize glucose in an attempt to develop an anticancer drug that would interrupt this process. By comparing normal and breast cancer cells, Dr. Yang was able to pinpoint tumor-specific metabolism and characterize the metabolic changes that occur during cancer development. He was also able to select a set of prospective drug targets. Dr. Yang is continuing to study the genetic patterns in breast cell metabolism to determine the best ways to target this process. The research was published in Breast Cancer Research and Treatment 2008(100)297-307 and Metabolomics 2008(4)13-29.

The Role of Estrogen-Related Receptors in Breast Cancer
The small family of estrogen-related receptors consists of three proteins that control the expression of many genes important in maintaining normal cell growth. The three estrogen-related receptors are similar to the estrogen receptors, but they are not activated by natural estrogens. This similarity has led researchers to hypothesize that estrogen-related receptors, like estrogen receptors, play a role in breast cancer development or growth. Anastasia Kralli, Ph.D., at the Scripps Research Institute, La Jolla, used human breast cancer cells to study estrogen-related receptors and the role they play in breast cancer growth, metastasis, and response to drugs. Dr. Kralli and her team found that cells with higher levels of estrogen-related receptor activity responded as expected to chemotherapy drugs in cell culture studies. However, these cells were not able to grow and develop when transplanted into the breast area of mice. These findings demonstrate that certain changes in estrogen-related receptor activity appear to keep breast cancer tumors from growing in animal models. This work could lead to the development of new treatments that use estrogen-related receptor molecules to slow breast cancer growth.

The Role of LMO4 in Breast Cancer
Cancer cells have acquired genetic mutations that give them the ability to grow and divide uncontrollably. Zhengquan Yu, Ph.D., at the University of California, Irvine, and colleagues investigated whether a protein called LMO4, which is found in breast epithelial cells (the cells in which breast cancer begins), helps to regulate cell proliferation and cell death. Dr. Yu and his team also explored whether cells that have too much of this protein begin to grow and divide uncontrollably. Using a mouse model, Dr. Yu and his team showed that mammary epithelial cells that lack an LMO4 gene are less likely to divide and more likely to die. While conducting these studies, the research team found that another gene, called BMP7, is regulated by LMO4 in breast cancer cells. Dr. Yu and his team intend to continue to study the role of BMP7 in mammary gland development and breast cancer. This work could advance our understanding of how breast cancer develops. Results from this research were published in Oncogene 2007(26)6431-41.

Grants in Progress: 2008

Analysis of MicroRNA Expression in Breast Cancer Stem Cells
Yohei Shimono
Stanford University

Breast Cancer Studies in a 3-D Cell Culture System
Robert Abraham
The Burnham Institute of Medical Research

Breast Tumor Responses to Novel TGF-beta Inhibitors
Kelly Harradine
University of California, San Francisco

Competition for ADA2 and 3 to Inhibit p53 in Breast Cancer
Min Yang
University of California, Irvine

Cytoskeletal Regulation of Invading Breast Cells
Catherine Jacobson
University of California, San Francisco

Defining Mammary Cancer Origins in a Mouse Model of DCIS
Alexander Borowski
University of California, Davis

Determination of Stromal Gene Expression in Breast Cancer
Robert West
Palo Alto Institute for Research & Education

Functional Analysis of BORIS, A Novel DNA-binding Protein
Paul Yaswen
Lawrence Berkeley National Laboratory

Indole (I3C) Control of Breast Cancer by ER Downregulation
Crystal Marconett
University of California, Berkeley

Inflammation Alters Transcription by ER in Breast Cancer
Eliot Bourk
University of California, San Diego

Lipid Raft Composition in Deregulated ERBB2 Signaling
Ralf Landgraf
University of California, Los Angeles

Mechanisms of Daxx-mediated Apoptosis in Breast Cancer
Lorena Puto
The Burnham Institute for Medical Research

A New Mouse Model of PI3-kinase Induced Breast Cancer
Jun Zhang
University of California, San Francisco

Novel Approach to Analyze Estrogen Action in Breast Cancer
Brian Elicieri
La Jolla Institute for Molecular Medicine

Novel Regulation of the Rb Pathway in Breast Epithelium
Deborah Burkhart
Stanford University

Profiling Drug Metabolism (P450) Proteins in Breast Cancer
Aaron Wright
Scripps Research Institute

Reactivation of the Inactive X Chromosome and Breast Cancer
Angela Anderson
University of California, San Francisco

Regulation of Mammary Epithelial Invasion by MMPs and FGFs
Andrew Ewald
University of California, San Francisco

The Relationship of BRCA1 and HMGA2 in Breast Cancer
Connie Tsai
University of California, Irvine

The Role Chk1 in Breast Cancer DNA Damage Repair
Jennifer Scorah
Scripps Research Institute

The Role of Podosomes in Breast Cancer Metastasis
Barbara Blouw
The Burnham Institute of Medical Research

Stem Cells in Breast Cancer Metastasis
Brunhilde Felding-Habermann, John Yates & Evan Snyder
Scripps Research Institute and The Burnham Institute of Medical Research

Structural Analysis of Cancer-relevant BCRA2 Mutations
Henning Stahlberg
University of California, Davis

Targeting Tissue Factor in Breast Cancer
Florence Schaffner
Scripps Research Institute

Telomerase, Mammary Stem Cells, and Breast Cancer
Steven Artandi
Stanford University

Trask, a Candidate Breast Cancer Metastasis Protein
Ching Hang Wong
University of California, San Francisco

Research Initiated in 2008

Chemokine Receptor Signaling in Breast Cancer
Morgan O’Hayre
University of California, San Diego

Dietary Metabolite Inhibition of Breast Cancer Cell Survival
Holly Hantz
University of California, Berkeley

Dissecting the Role of Twist in Breast Cancer Metastasis
Janine Low-Marchelli
University of California, San Diego

Global Analysis of Protein Ubiquitination in Breast Cancer
Stefan Grotegut
Sidney Kimmel Cancer Center

Maternal Embryonic Leucine Zipper Kinase in Mammary Tumors
Robert Oshima
The Burnham Institute for Medical Research

Nanolipoproteins to Study Breast Cancer Growth Receptors
Paul Henderson
University of California, Davis

Regulation of Breast Stem-progenitor Cell Chromatin by Pygo2
Bingnan Gu
University of California, Irvine

Role of Estrogen-modulated Protein AGR2 in Breast Cancer
Mikhail Geyfman
University of California, Irvine

Tumor Suppressor 14-3-3sigma in Breast Cancer Progression
Aaron Boudreau
Lawrence Berkeley National Laboratory